nsv3898361
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:44,932,444
- Description:GRCh37/hg19 11q13.4-23.3(chr11:71588805-116680918)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 112541 SVs from 142 studies. See in: genome view
Overlapping variant regions from other studies: 112491 SVs from 142 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3898361 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 71,877,759 | 116,810,202 |
| nsv3898361 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 71,588,805 | 116,680,918 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153881 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000683374.1, VCV000563885.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15153881 | Remapped | Good | NC_000011.10:g.(?_ 71877759)_(1168102 02_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 71,877,759 | 116,810,202 |
| nssv15153881 | Submitted genomic | NC_000011.9:g.(?_7 1588805)_(11668091 8_?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 71,588,805 | 116,680,918 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153881 | GRCh37: NC_000011.9:g.(?_71588805)_(116680918_?)dup | copy number gain | germline | not provided | Pathogenic | ClinVar | RCV000683374.1, VCV000563885.1 | 3 |