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dbVar

Database of genomic structural variation

nsv3897846

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:38,591

Description:GRCh37/hg19 16q21(chr16:57475008-57513598)x1 AND See cases

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 33 studies. See in: genome view

Remapped(Score: Perfect):57,441,096-57,479,686

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3897846	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	57,441,096	57,479,686
nsv3897846	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	57,475,008	57,513,598

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15141503	copy number loss	Multiple	Multiple	See cases	Uncertain significance	ClinVar	RCV000448449.3, VCV000394759.3	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15141503	Remapped	Perfect	NC_000016.10:g.(?_ 57441096)_(5747968 6_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	57,441,096	57,479,686
nssv15141503	Submitted genomic		NC_000016.9:g.(?_5 7475008)_(57513598 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	57,475,008	57,513,598

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15141503	GRCh37: NC_000016.9:g.(?_57475008)_(57513598_?)del	copy number loss	not provided	See cases	Uncertain significance	ClinVar	RCV000448449.3, VCV000394759.3	1

No genotype data were submitted for this variant

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