nsv3894920
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:777,490
- Description:GRCh37/hg19 19p12(chr19:22867705-23645194)x4 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3596 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 3596 SVs from 100 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3894920 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 22,684,903 | 23,462,392 |
nsv3894920 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 22,867,705 | 23,645,194 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15131547 | copy number gain | Multiple | Multiple | See cases | Uncertain significance | ClinVar | RCV000598637.2, VCV000503594.2 | 4 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15131547 | Remapped | Perfect | NC_000019.10:g.(?_ 22684903)_(2346239 2_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 22,684,903 | 23,462,392 |
nssv15131547 | Submitted genomic | NC_000019.9:g.(?_2 2867705)_(23645194 _?)dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 22,867,705 | 23,645,194 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15131547 | GRCh37: NC_000019.9:g.(?_22867705)_(23645194_?)dup | copy number gain | unknown | See cases | Uncertain significance | ClinVar | RCV000598637.2, VCV000503594.2 | 4 |