nsv3894197
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:28,146
- Description:GRCh37/hg19 9q34.3(chr9:139726282-139754427)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 381 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 381 SVs from 55 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3894197 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 136,831,830 | 136,859,975 |
| nsv3894197 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 139,726,282 | 139,754,427 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15175270 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000753212.2, VCV000616576.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15175270 | Remapped | Perfect | NC_000009.12:g.(?_ 136831830)_(136859 975_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 136,831,830 | 136,859,975 |
| nssv15175270 | Submitted genomic | NC_000009.11:g.(?_ 139726282)_(139754 427_?)dup | GRCh37 (hg19) | NC_000009.11 | Chr9 | 139,726,282 | 139,754,427 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15175270 | GRCh37: NC_000009.11:g.(?_139726282)_(139754427_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000753212.2, VCV000616576.2 | 3 |