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dbVar

Database of genomic structural variation

nsv3894158

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:14,077

Description:GRCh37/hg19 16q12.2(chr16:55842641-55856717)x3 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 341 SVs from 71 studies. See in: genome view

Remapped(Score: Perfect):55,808,729-55,822,805

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3894158	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	55,808,729	55,822,805
nsv3894158	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	55,842,641	55,856,717

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15160690	copy number gain	Multiple	Multiple	not provided	Benign	ClinVar	RCV000739160.2, VCV000602524.2	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15160690	Remapped	Perfect	NC_000016.10:g.(?_ 55808729)_(5582280 5_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,808,729	55,822,805
nssv15160690	Submitted genomic		NC_000016.9:g.(?_5 5842641)_(55856717 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	55,842,641	55,856,717

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15160690	GRCh37: NC_000016.9:g.(?_55842641)_(55856717_?)dup	copy number gain	unknown	not provided	Benign	ClinVar	RCV000739160.2, VCV000602524.2	3

No genotype data were submitted for this variant

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