nsv3891722
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:21,648,242
- Description:GRCh37/hg19 9q31.1-33.3(chr9:104604851-126253089) AND not specified
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 54172 SVs from 134 studies. See in: genome view
Overlapping variant regions from other studies: 54173 SVs from 134 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3891722 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 101,842,569 | 123,490,810 |
| nsv3891722 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 104,604,851 | 126,253,089 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969361 | copy number loss | Multiple | Multiple | not specified | Pathogenic | ClinVar | RCV002052825.3, VCV001527539.3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17969361 | Remapped | Perfect | NC_000009.12:g.(?_ 101842569)_(123490 810_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 101,842,569 | 123,490,810 |
| nssv17969361 | Submitted genomic | NC_000009.11:g.(?_ 104604851)_(126253 089_?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 104,604,851 | 126,253,089 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969361 | GRCh37: NC_000009.11:g.(?_104604851)_(126253089_?)del | copy number loss | germline | not specified | Pathogenic | ClinVar | RCV002052825.3, VCV001527539.3 |