nsv3889051
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:100,321
- Description:GRCh37/hg19 2q12.3(chr2:109392302-109492622)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 408 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 408 SVs from 51 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3889051 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 108,775,846 | 108,876,166 |
nsv3889051 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 109,392,302 | 109,492,622 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15175207 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000753078.2, VCV000616442.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15175207 | Remapped | Perfect | NC_000002.12:g.(?_ 108775846)_(108876 166_?)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 108,775,846 | 108,876,166 |
nssv15175207 | Submitted genomic | NC_000002.11:g.(?_ 109392302)_(109492 622_?)dup | GRCh37 (hg19) | NC_000002.11 | Chr2 | 109,392,302 | 109,492,622 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15175207 | GRCh37: NC_000002.11:g.(?_109392302)_(109492622_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000753078.2, VCV000616442.2 | 3 |