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dbVar

Database of genomic structural variation

nsv3888652

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:148,214

Description:GRCh37/hg19 3p11.1(chr3:89381249-89529462)x3 AND See cases

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 654 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):89,332,099-89,480,312

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3888652	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	89,332,099	89,480,312
nsv3888652	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	89,381,249	89,529,462

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15142792	copy number gain	Multiple	Multiple	See cases	Uncertain significance	ClinVar	RCV000448500.3, VCV000394321.3	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15142792	Remapped	Perfect	NC_000003.12:g.(?_ 89332099)_(8948031 2_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	89,332,099	89,480,312
nssv15142792	Submitted genomic		NC_000003.11:g.(?_ 89381249)_(8952946 2_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	89,381,249	89,529,462

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15142792	GRCh37: NC_000003.11:g.(?_89381249)_(89529462_?)dup	copy number gain	not provided	See cases	Uncertain significance	ClinVar	RCV000448500.3, VCV000394321.3	3

No genotype data were submitted for this variant

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