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dbVar

Database of genomic structural variation

nsv3887629

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:585,577

Description:GRCh37/hg19 Xq21.2-21.31(chrX:85871362-86456938)x3 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1199 SVs from 65 studies. See in: genome view

Remapped(Score: Perfect):86,616,359-87,201,935

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3887629	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	86,616,359	87,201,935
nsv3887629	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	85,871,362	86,456,938

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15175056	copy number gain	Multiple	Multiple	not provided	Benign	ClinVar	RCV000753640.2, VCV000617004.2	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15175056	Remapped	Perfect	NC_000023.11:g.(?_ 86616359)_(8720193 5_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	86,616,359	87,201,935
nssv15175056	Submitted genomic		NC_000023.10:g.(?_ 85871362)_(8645693 8_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	85,871,362	86,456,938

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15175056	GRCh37: NC_000023.10:g.(?_85871362)_(86456938_?)dup	copy number gain	unknown	not provided	Benign	ClinVar	RCV000753640.2, VCV000617004.2	3

No genotype data were submitted for this variant

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