Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3886411

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:422,158

Description:GRCh37/hg19 3q13.13(chr3:108597544-109019701)x3 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1310 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):108,878,697-109,300,854

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3886411	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	108,878,697	109,300,854
nsv3886411	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	108,597,544	109,019,701

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15153500	copy number gain	Multiple	Multiple	not provided	Likely benign	ClinVar	RCV000682292.1, VCV000562803.1	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15153500	Remapped	Perfect	NC_000003.12:g.(?_ 108878697)_(109300 854_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	108,878,697	109,300,854
nssv15153500	Submitted genomic		NC_000003.11:g.(?_ 108597544)_(109019 701_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	108,597,544	109,019,701

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15153500	GRCh37: NC_000003.11:g.(?_108597544)_(109019701_?)dup	copy number gain	germline	not provided	Likely benign	ClinVar	RCV000682292.1, VCV000562803.1	3

No genotype data were submitted for this variant

You are here: NCBI