nsv3884951
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:533,544
- Description:GRCh37/hg19 1p34.1-33(chr1:46747177-47280720)x3 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1344 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 1344 SVs from 71 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3884951 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 46,281,505 | 46,815,048 |
| nsv3884951 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 46,747,177 | 47,280,720 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15149430 | copy number gain | Multiple | Multiple | See cases | Uncertain significance | ClinVar | RCV000449344.3, VCV000395564.3 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15149430 | Remapped | Perfect | NC_000001.11:g.(?_ 46281505)_(4681504 8_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 46,281,505 | 46,815,048 |
| nssv15149430 | Submitted genomic | NC_000001.10:g.(?_ 46747177)_(4728072 0_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 46,747,177 | 47,280,720 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15149430 | GRCh37: NC_000001.10:g.(?_46747177)_(47280720_?)dup | copy number gain | not provided | See cases | Uncertain significance | ClinVar | RCV000449344.3, VCV000395564.3 | 3 |