nsv3883874
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:296,802
- Description:GRCh37/hg19 3p21.31-21.2(chr3:50435928-50732729)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 593 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 593 SVs from 72 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3883874 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 50,398,497 | 50,695,298 |
nsv3883874 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 50,435,928 | 50,732,729 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15153476 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000682257.1, VCV000562768.1 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15153476 | Remapped | Perfect | NC_000003.12:g.(?_ 50398497)_(5069529 8_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 50,398,497 | 50,695,298 |
nssv15153476 | Submitted genomic | NC_000003.11:g.(?_ 50435928)_(5073272 9_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 50,435,928 | 50,732,729 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15153476 | GRCh37: NC_000003.11:g.(?_50435928)_(50732729_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV000682257.1, VCV000562768.1 | 3 |