nsv3882713
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:105,385
- Description:GRCh37/hg19 3q11.2(chr3:97631081-97736465)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 238 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 238 SVs from 44 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3882713 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 97,912,237 | 98,017,621 |
| nsv3882713 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 97,631,081 | 97,736,465 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15142686 | copy number loss | Multiple | Multiple | See cases | Uncertain significance | ClinVar | RCV000447778.3, VCV000394830.3 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15142686 | Remapped | Perfect | NC_000003.12:g.(?_ 97912237)_(9801762 1_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 97,912,237 | 98,017,621 |
| nssv15142686 | Submitted genomic | NC_000003.11:g.(?_ 97631081)_(9773646 5_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 97,631,081 | 97,736,465 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15142686 | GRCh37: NC_000003.11:g.(?_97631081)_(97736465_?)del | copy number loss | not provided | See cases | Uncertain significance | ClinVar | RCV000447778.3, VCV000394830.3 | 1 |