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dbVar

Database of genomic structural variation

nsv3880554

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:94,741

Description:GRCh37/hg19 Xq28(chrX:152770714-152865451)x2 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 267 SVs from 46 studies. See in: genome view

Remapped(Score: Good):153,505,256-153,599,996

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3880554	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	153,505,256	153,599,996
nsv3880554	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	152,770,714	152,865,451

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15175504	copy number gain	Multiple	Multiple	not provided	Benign	ClinVar	RCV000753921.2, VCV000617285.2	2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15175504	Remapped	Good	NC_000023.11:g.(?_ 153505256)_(153599 996_?)dup	GRCh38.p12	First Pass	NC_000023.11	ChrX	153,505,256	153,599,996
nssv15175504	Submitted genomic		NC_000023.10:g.(?_ 152770714)_(152865 451_?)dup	GRCh37 (hg19)		NC_000023.10	ChrX	152,770,714	152,865,451

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15175504	GRCh37: NC_000023.10:g.(?_152770714)_(152865451_?)dup	copy number gain	unknown	not provided	Benign	ClinVar	RCV000753921.2, VCV000617285.2	2

No genotype data were submitted for this variant

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