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dbVar

Database of genomic structural variation

nsv3879046

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:11,537

Description:GRCh37/hg19 1q31.3(chr1:196621169-196632705)x4 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 177 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):196,652,039-196,663,575

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3879046	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	196,652,039	196,663,575
nsv3879046	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	196,621,169	196,632,705

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15157627	copy number gain	Multiple	Multiple	not provided	Benign	ClinVar	RCV000736812.2, VCV000600176.2	4

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15157627	Remapped	Perfect	NC_000001.11:g.(?_ 196652039)_(196663 575_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	196,652,039	196,663,575
nssv15157627	Submitted genomic		NC_000001.10:g.(?_ 196621169)_(196632 705_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	196,621,169	196,632,705

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15157627	GRCh37: NC_000001.10:g.(?_196621169)_(196632705_?)dup	copy number gain	unknown	not provided	Benign	ClinVar	RCV000736812.2, VCV000600176.2	4

No genotype data were submitted for this variant

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