nsv3877981
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:622,432
- Description:GRCh37/hg19 1p13.2(chr1:114209101-114831532)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1375 SVs from 76 studies. See in: genome view
Overlapping variant regions from other studies: 1375 SVs from 76 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3877981 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 113,666,479 | 114,288,910 |
nsv3877981 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 114,209,101 | 114,831,532 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15171115 | copy number gain | Multiple | Multiple | not provided | Likely benign | ClinVar | RCV000749141.2, VCV000612505.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15171115 | Remapped | Perfect | NC_000001.11:g.(?_ 113666479)_(114288 910_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 113,666,479 | 114,288,910 |
nssv15171115 | Submitted genomic | NC_000001.10:g.(?_ 114209101)_(114831 532_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 114,209,101 | 114,831,532 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15171115 | GRCh37: NC_000001.10:g.(?_114209101)_(114831532_?)dup | copy number gain | unknown | not provided | Likely benign | ClinVar | RCV000749141.2, VCV000612505.2 | 3 |