nsv3875994
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,196
- Description:GRCh37/hg19 4q32.1(chr4:156596190-156598385)x0 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 150 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 150 SVs from 52 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3875994 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 155,675,038 | 155,677,233 |
| nsv3875994 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 156,596,190 | 156,598,385 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15166154 | copy number loss | Multiple | Multiple | not provided | Benign | ClinVar | RCV000744072.2, VCV000607436.2 | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15166154 | Remapped | Perfect | NC_000004.12:g.(?_ 155675038)_(155677 233_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 155,675,038 | 155,677,233 |
| nssv15166154 | Submitted genomic | NC_000004.11:g.(?_ 156596190)_(156598 385_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 156,596,190 | 156,598,385 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15166154 | GRCh37: NC_000004.11:g.(?_156596190)_(156598385_?)del | copy number loss | unknown | not provided | Benign | ClinVar | RCV000744072.2, VCV000607436.2 | 0 |