nsv3874694
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:809,093
- Description:GRCh37/hg19 6p21.1(chr6:45061951-45871043)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1844 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 1844 SVs from 73 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3874694 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 45,094,214 | 45,903,306 |
| nsv3874694 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 45,061,951 | 45,871,043 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15151440 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000682666.1, VCV000563177.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15151440 | Remapped | Perfect | NC_000006.12:g.(?_ 45094214)_(4590330 6_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 45,094,214 | 45,903,306 |
| nssv15151440 | Submitted genomic | NC_000006.11:g.(?_ 45061951)_(4587104 3_?)dup | GRCh37 (hg19) | NC_000006.11 | Chr6 | 45,061,951 | 45,871,043 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15151440 | GRCh37: NC_000006.11:g.(?_45061951)_(45871043_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV000682666.1, VCV000563177.1 | 3 |