nsv3874413
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,064,031
- Description:GRCh37/hg19 3p11.1(chr3:89440509-90504539)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2703 SVs from 98 studies. See in: genome view
Overlapping variant regions from other studies: 2698 SVs from 98 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3874413 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 89,391,359 | 90,455,389 |
| nsv3874413 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 89,440,509 | 90,504,539 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15163822 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000742613.2, VCV000605977.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15163822 | Remapped | Perfect | NC_000003.12:g.(?_ 89391359)_(9045538 9_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 89,391,359 | 90,455,389 |
| nssv15163822 | Submitted genomic | NC_000003.11:g.(?_ 89440509)_(9050453 9_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 89,440,509 | 90,504,539 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15163822 | GRCh37: NC_000003.11:g.(?_89440509)_(90504539_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000742613.2, VCV000605977.2 | 3 |