nsv3331967

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:10
Validation:Not tested
Clinical Assertions: No
Region Size:21,678

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

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Select assembly:

Overlapping variant regions from other studies: 329 SVs from 69 studies. See in: genome view

Submitted genomic1,894,049-1,915,726

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3331967	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	1,894,049	1,915,726
nsv3331967	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14513583	deletion	SAMN03255769	Sequencing	de novo and local sequence assembly	21,134
nssv14514879	deletion	SAMN09690649	Sequencing	de novo and local sequence assembly	21,495
nssv14515351	deletion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009
nssv14515707	deletion	SAMN04229552	Sequencing	de novo and local sequence assembly	24,632
nssv14517916	deletion	SAMN05603729	Sequencing	de novo and local sequence assembly	24,108
nssv14518112	deletion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14519496	deletion	SAMN02744161	Sequencing	de novo and local sequence assembly	20,941
nssv14526485	deletion	SAMN06885952	Sequencing	de novo and local sequence assembly	28,070
nssv14526792	deletion	SAMN05603745	Sequencing	de novo and local sequence assembly	27,447
nssv14530031	deletion	SAMN05181962	Sequencing	de novo and local sequence assembly	23,563

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14513583	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14514879	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14515351	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14515707	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14517916	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14518112	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14519496	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14526485	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14526792	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14530031	Submitted genomic		NC_000011.10:g.189 4049_1915726del	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv14513583	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14514879	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14515351	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14515707	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14517916	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14518112	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14519496	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14526485	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14526792	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956
nssv14530031	Remapped	Perfect	NC_000011.9:g.1915 279_1936956delNC_0 00011.9:g.1915279_ 1936956del	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956

Showing 20 of 30

dbVar

Database of genomic structural variation

nsv3331967

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Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant