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dbVar

Database of genomic structural variation

nsv3329723

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:10,940

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 549 SVs from 66 studies. See in: genome view

Submitted genomic107,365,916-107,376,855

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3329723	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	107,365,916	107,376,855
nsv3329723	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14512096	deletion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631
nssv14517388	deletion	SAMN02744161	Sequencing	de novo and local sequence assembly	20,941
nssv14519036	deletion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009
nssv14523316	deletion	SAMN05603745	Sequencing	de novo and local sequence assembly	27,447
nssv14523358	deletion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14525868	deletion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14512096	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14517388	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14519036	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14523316	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14523358	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14525868	Submitted genomic		NC_000011.10:g.107 365916_107376855de l	GRCh38 (hg38)		NC_000011.10	Chr11	107,365,916	107,376,855
nssv14512096	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581
nssv14517388	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581
nssv14519036	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581
nssv14523316	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581
nssv14523358	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581
nssv14525868	Remapped	Perfect	NC_000011.9:g.1072 36642_107247581del NC_000011.9:g.1072 36642_107247581del	GRCh37.p13	First Pass	NC_000011.9	Chr11	107,236,642	107,247,581

Showing 12 of 18

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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