nsv3169066
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:93,345,752
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 258190 SVs from 151 studies. See in: genome view
Overlapping variant regions from other studies: 257465 SVs from 151 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3169066 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 5,923,701 (-557, +557) | 99,269,452 (-557, +557) |
| nsv3169066 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 5,923,934 (-557, +557) | 99,717,328 (-557, +557) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14239859 | inversion | DB56 | Sequencing | Paired-end mapping | 34 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14239859 | Remapped | Good | NC_000006.12:g.(59 23144_5924258)_(99 268895_99270009)in v135 | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 5,923,701 (-557, +557) | 99,269,452 (-557, +557) |
| nssv14239859 | Submitted genomic | NC_000006.11:g.(59 23377_5924491)_(99 716771_99717885)in v135 | GRCh37 (hg19) | NC_000006.11 | Chr6 | 5,923,934 (-557, +557) | 99,717,328 (-557, +557) |