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dbVar

Database of genomic structural variation

nsv3109658

Organism: Pan troglodytes

Study:nstd144 (Gardner et al. 2017)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:Pan_troglodytes-2.1.4 (panTro4)

Variant Calls:1
Validation:Not tested
Region Size:1

Description:TSD=GATAAATTAGC;MEINFO=AluYc1,1,281,-
Publication(s):Gardner et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Genotype Information

Genome View

Select assembly:

Submitted genomic34,472,720-34,472,720

Variant Region Placement Information

Variant Region ID	Placement Type	Assembly	Assembly Unit	Sequence ID	Chr	Start	Stop
nsv3109658	Submitted genomic	Pan_troglodytes-2.1.4 (panTro4)	Primary Assembly	NC_006482.3	Chr15	34,472,720	34,472,720

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv14069212	alu insertion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Assembly	Sequence ID	Chr	Start	Stop
nssv14069212	Submitted genomic	Pan_troglodytes-2.1.4 (panTro4)	NC_006482.3	Chr15	34,472,720	34,472,720

No validation data were submitted for this variant

No genotype data were submitted for this variant

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