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dbVar

Database of genomic structural variation

nsv2739782

Organism: Homo sapiens

Study:nstd130 (Leppa et al. 2016)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,058,673

Publication(s):Leppa et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 5811 SVs from 111 studies. See in: genome view

Remapped(Score: Perfect):979,912-2,038,584

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv2739782	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	979,912	2,038,584
nsv2739782	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	1,029,912	2,088,585
nsv2739782	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000016.8	Chr16	969,913	2,028,586

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv13597451	deletion	SNP array	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv13597451	Remapped	Perfect	NC_000016.10:g.(?_ 979912)_(2038584_? )del	GRCh38.p12	First Pass	NC_000016.10	Chr16	979,912	2,038,584
nssv13597451	Remapped	Perfect	NC_000016.9:g.(?_1 029912)_(2088585_? )del	GRCh37.p13	First Pass	NC_000016.9	Chr16	1,029,912	2,088,585
nssv13597451	Submitted genomic		NC_000016.8:g.(?_9 69913)_(2028586_?) del	NCBI36 (hg18)		NC_000016.8	Chr16	969,913	2,028,586

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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