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dbVar

Database of genomic structural variation

nsv2739725

Organism: Homo sapiens

Study:nstd130 (Leppa et al. 2016)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,512,296

Publication(s):Leppa et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 9014 SVs from 117 studies. See in: genome view

Remapped(Score: Perfect):774,098-2,286,393

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv2739725	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	774,098	2,286,393
nsv2739725	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	824,098	2,336,394
nsv2739725	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000016.8	Chr16	764,099	2,276,395

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv13597011	deletion	SNP array	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv13597011	Remapped	Perfect	NC_000016.10:g.(?_ 774098)_(2286393_? )del	GRCh38.p12	First Pass	NC_000016.10	Chr16	774,098	2,286,393
nssv13597011	Remapped	Perfect	NC_000016.9:g.(?_8 24098)_(2336394_?) del	GRCh37.p13	First Pass	NC_000016.9	Chr16	824,098	2,336,394
nssv13597011	Submitted genomic		NC_000016.8:g.(?_7 64099)_(2276395_?) del	NCBI36 (hg18)		NC_000016.8	Chr16	764,099	2,276,395

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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