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nsv2078229

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:15
  • Description:MOTIF=[TATG],NS=[301],REF=[3.75],RL=[15],RPA=[
    ],RU=[TATG],QUAL=[286366]
  • Publication(s):Mallick et al. 2016

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 142 SVs from 22 studies. See in: genome view    
Remapped(Score: Perfect):148,955,593-148,955,607Question Mark
Overlapping variant regions from other studies: 2 SVs from 2 studies. See in: genome view    
Remapped(Score: Perfect):21,523-21,537Question Mark
Overlapping variant regions from other studies: 142 SVs from 22 studies. See in: genome view    
Submitted genomic149,812,107-149,812,121Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv2078229RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000002.12Chr2148,955,593148,955,607
nsv2078229RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNW_003571033.2Chr2|NW_00
3571033.2		21,52321,537
nsv2078229Submitted genomicGRCh37 (hg19)Primary AssemblyNC_000002.11Chr2149,812,107149,812,121

Variant Call Information

Variant Call IDTypeRepeat MotifMethodAnalysis
nssv10969215short tandem repeat(TATG) 3.75 (ref)SequencingGenotyping

Variant Call Placement Information

Variant Call IDPlacement TypeScoreAssemblyReciprocitySequence IDChrStartStop
nssv10969215RemappedPerfectGRCh38.p12Second PassNW_003571033.2Chr2|NW_00
3571033.2		21,52321,537
nssv10969215RemappedPerfectGRCh38.p12First PassNC_000002.12Chr2148,955,593148,955,607
nssv10969215Submitted genomicGRCh37 (hg19)NC_000002.11Chr2149,812,107149,812,121

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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