Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv1160557

Organism: Homo sapiens

Study:nstd111 (Lou et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:279,582

Publication(s):Lou et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2311 SVs from 91 studies. See in: genome view

Remapped(Score: Perfect):1,038,223-1,317,804

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1160557	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	1,038,223	1,054,061	1,310,137	1,317,804
nsv1160557	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	1,038,222	1,054,060	1,310,136	1,317,803

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4032648	deletion	SNP array	Probe signal intensity	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4032648	Remapped	Perfect	NC_000019.10:g.(10 38223_1054061)_(13 10137_1317804)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	1,038,223	1,054,061	1,310,137	1,317,804
nssv4032648	Submitted genomic		NC_000019.9:g.(103 8222_1054060)_(131 0136_1317803)del	GRCh37 (hg19)		NC_000019.9	Chr19	1,038,222	1,054,060	1,310,136	1,317,803

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI