nsv581929
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:161,880
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 911 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 911 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 449 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv581929 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 52,372,222 | 52,534,101 |
| nsv581929 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 52,599,360 | 52,761,239 |
| nsv581929 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 52,452,864 | 52,614,743 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv908718 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv908718 | Remapped | Perfect | NC_000002.12:g.(?_ 52372222)_(5253410 1_?)del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 52,372,222 | 52,534,101 |
| nssv908718 | Remapped | Perfect | NC_000002.11:g.(?_ 52599360)_(5276123 9_?)del | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 52,599,360 | 52,761,239 |
| nssv908718 | Submitted genomic | NC_000002.10:g.(?_ 52452864)_(5261474 3_?)del | NCBI36 (hg18) | NC_000002.10 | Chr2 | 52,452,864 | 52,614,743 |