nsv4560935
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 97 SVs from 6 studies. See in: genome view
Overlapping variant regions from other studies: 2 SVs from 1 studies. See in: genome view
Overlapping variant regions from other studies: 98 SVs from 6 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4560935 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000024.10 | ChrY | 21,635,233 | 21,635,233 |
| nsv4560935 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_018654726.1 | ChrY|NW_01 8654726.1 | 56,292 | 56,292 |
| nsv4560935 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000024.9 | ChrY | 23,797,119 | 23,797,119 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16091016 | mobile element insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16091016 | Remapped | Perfect | NW_018654726.1:g.5 6292_56293ins281 | GRCh38.p12 | Second Pass | NW_018654726.1 | ChrY|NW_01 8654726.1 | 56,292 | 56,292 |
| nssv16091016 | Remapped | Perfect | NC_000024.10:g.216 35233_21635234ins2 81 | GRCh38.p12 | First Pass | NC_000024.10 | ChrY | 21,635,233 | 21,635,233 |
| nssv16091016 | Submitted genomic | NC_000024.9:g.2379 7119_23797120ins28 1 | GRCh37.p13 | NC_000024.9 | ChrY | 23,797,119 | 23,797,119 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16091016 | <0.001 | 2 | 11056 |