Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3908873

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: Yes
Region Size:134,837,961

Description:
See descriptions for individual calls in download files

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 358524 SVs from 154 studies. See in: genome view

Remapped(Score: Good):230,616-135,068,576

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3908873	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	230,616	135,068,576
nsv3908873	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	230,616	134,938,470

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15150306	copy number gain	Multiple	Multiple	See cases	Pathogenic	ClinVar	RCV000511729.2, VCV000441904.2
nssv15150623	copy number gain	Multiple	Multiple	See cases	Pathogenic	ClinVar	RCV000510881.2, VCV000441903.2	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15150306	Remapped	Good	NC_000011.10:g.(?_ 230616)_(135068576 _?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	230,616	135,068,576
nssv15150623	Remapped	Good	NC_000011.10:g.(?_ 230616)_(135068576 _?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	230,616	135,068,576
nssv15150306	Submitted genomic		NC_000011.9:g.(?_2 30616)_(134938470_ ?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	230,616	134,938,470
nssv15150623	Submitted genomic		NC_000011.9:g.(?_2 30616)_(134938470_ ?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	230,616	134,938,470

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15150306	GRCh37: NC_000011.9:g.(?_230616)_(134938470_?)dup	copy number gain	not provided	See cases	Pathogenic	ClinVar	RCV000511729.2, VCV000441904.2
nssv15150623	GRCh37: NC_000011.9:g.(?_230616)_(134938470_?)dup	copy number gain	not provided	See cases	Pathogenic	ClinVar	RCV000510881.2, VCV000441903.2	3

No genotype data were submitted for this variant

You are here: NCBI