esv3992665
- Organism: Homo sapiens
- Study:estd218 (Simpson et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:361,693
- Publication(s):Simpson et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3932 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 4054 SVs from 98 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3992665 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 22,125,036 | 22,486,728 |
| esv3992665 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 22,592,994 | 22,955,716 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|
| essv26046656 | copy number loss | SLI_57_1 | SNP array | Probe signal intensity | Specific language impairment 1 | 1 | essv26046657, essv26046658, essv26046660 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv26046656 | Remapped | Good | NC_000014.9:g.(?_2 2125036)_(22486728 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,125,036 | 22,486,728 |
| essv26046656 | Submitted genomic | NC_000014.8:g.(?_2 2592994)_(22955716 _?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,592,994 | 22,955,716 |