esv3627945
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,854
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 229 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 229 SVs from 36 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3627945 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 122,683,658 (-500, +0) | 122,694,511 (-0, +500) |
| esv3627945 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 122,554,366 (-500, +0) | 122,565,219 (-0, +500) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| essv14296762 | deletion | SAMN00006474 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,735 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv14296762 | Remapped | Perfect | NC_000011.10:g.(12 2683158_122683658) _(122694511_122695 011)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 122,683,658 (-500, +0) | 122,694,511 (-0, +500) |
| essv14296762 | Submitted genomic | NC_000011.9:g.(122 553866_122554366)_ (122565219_1225657 19)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 122,554,366 (-500, +0) | 122,565,219 (-0, +500) |