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dbVar

Database of genomic structural variation

esv3802363

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:inversion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:chr17:g.o17273211inschr17:g.o17270516_o1727042
6insAGAGA_chr17:g.17273661bkpt
Publication(s):Campbell et al. 2010, Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 348 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):17,367,112-17,367,112

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3802363	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	17,367,112	17,367,112
esv3802363	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	17,367,202	17,367,202
esv3802363	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	17,369,897	17,369,897
esv3802363	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	17,370,347	17,370,347
esv3802363	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	17,270,426	17,270,426
esv3802363	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	17,270,516	17,270,516
esv3802363	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	17,273,211	17,273,211
esv3802363	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	17,273,661	17,273,661

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16591877	intrachromosomal translocation	1109522	Curated	Curated	60
essv16643495	intrachromosomal translocation	1109522	Curated	Curated	60

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
essv16591877	Remapped	Perfect	GRCh38.p12	First Pass	NC_000017.11	Chr17	17,367,112	17,367,112	-
essv16643495	Remapped	Perfect	GRCh38.p12	First Pass	NC_000017.11	Chr17	17,367,202	17,367,202	-
essv16643495	Remapped	Perfect	GRCh38.p12	First Pass	NC_000017.11	Chr17	17,369,897	17,369,897	-
essv16591877	Remapped	Perfect	GRCh38.p12	First Pass	NC_000017.11	Chr17	17,370,347	17,370,347	not reported
essv16591877	Submitted genomic		GRCh37 (hg19)		NC_000017.10	Chr17	17,270,426	17,270,426	-
essv16643495	Submitted genomic		GRCh37 (hg19)		NC_000017.10	Chr17	17,270,516	17,270,516	-
essv16643495	Submitted genomic		GRCh37 (hg19)		NC_000017.10	Chr17	17,273,211	17,273,211	-
essv16591877	Submitted genomic		GRCh37 (hg19)		NC_000017.10	Chr17	17,273,661	17,273,661	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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