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nstd183 (DECIPHER Consensus CNVs)

Organism:
Human
Study Type:
Control Set
Submitter:
TomasĀ Fitzgerald
Submitter URL:
https://decipher.sanger.ac.uk
Submitter version:
Feb 2020
Description:
This CNV consensus set represents common population CNVs with allele frequencies as displayed in the DECIPHER download file https://decipher.sanger.ac.uk/files/downloads/population_cnv.txt.gz. The set is comprised of a number of carefully selected, high resolution controls sets where frequency information is available. Data sets included are: 42 Million study (raw call lists and genotyped regions), WTCCC study (merged Affy6 data set), 1000 Genomes pilot (merged deletions and tandem duplications) and DDD study (national blood service controls and generation Scotland controls). See Variant Summary counts for nstd183 in dbVar Variant Summary.

Detailed Information: Download 55675 Variant Regions, Download 62074 Variant Calls, Download Both, FTP

Variant Summary

Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Submitted: GRCh37 (hg19)

Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.11Chr14,3754,932RemappedNC_000001.11
NC_000002.12Chr24,3924,840RemappedNC_000002.12
NC_000003.12Chr33,2203,556RemappedNC_000003.12
NC_000004.12Chr43,4053,776RemappedNC_000004.12
NC_000005.10Chr53,1883,558RemappedNC_000005.10
NC_000006.12Chr63,2573,580RemappedNC_000006.12
NC_000007.14Chr73,1933,521RemappedNC_000007.14
NC_000008.11Chr82,8763,163RemappedNC_000008.11
NC_000009.12Chr92,5922,901RemappedNC_000009.12
NC_000010.11Chr102,5302,792RemappedNC_000010.11
NC_000011.10Chr112,6842,950RemappedNC_000011.10
NC_000012.12Chr122,5902,840RemappedNC_000012.12
NC_000013.11Chr131,7461,918RemappedNC_000013.11
NC_000014.9Chr141,8662,071RemappedNC_000014.9
NC_000015.10Chr151,9232,237RemappedNC_000015.10
NC_000016.10Chr162,2562,561RemappedNC_000016.10
NC_000017.11Chr171,9742,271RemappedNC_000017.11
NC_000018.10Chr181,3361,462RemappedNC_000018.10
NC_000019.10Chr192,0452,372RemappedNC_000019.10
NC_000020.11Chr201,1881,295RemappedNC_000020.11
NC_000021.9Chr21669766RemappedNC_000021.9
NC_000022.11Chr221,1131,258RemappedNC_000022.11
NC_000023.11ChrX910996RemappedNC_000023.11
NT_187513.1Unplaced|NT_187513.133RemappedNT_187513.1
NT_187361.1Chr1|NT_187361.167RemappedNT_187361.1
NT_187364.1Chr1|NT_187364.111RemappedNT_187364.1
NT_187515.1Chr1|NT_187515.11012RemappedNT_187515.1
NT_187516.1Chr1|NT_187516.1910RemappedNT_187516.1
NT_187517.1Chr1|NT_187517.11012RemappedNT_187517.1
NT_187518.1Chr1|NT_187518.11924RemappedNT_187518.1
NT_187519.1Chr1|NT_187519.12125RemappedNT_187519.1
NT_187521.1Chr1|NT_187521.112RemappedNT_187521.1
NT_187646.1Chr1|NT_187646.11924RemappedNT_187646.1
NW_003315906.1Chr1|NW_003315906.123RemappedNW_003315906.1
NW_003315907.2Chr1|NW_003315907.21010RemappedNW_003315907.2
NW_009646194.1Chr1|NW_009646194.123RemappedNW_009646194.1
NW_009646195.1Chr1|NW_009646195.111RemappedNW_009646195.1
NW_009646196.1Chr1|NW_009646196.123RemappedNW_009646196.1
NW_011332687.1Chr1|NW_011332687.189RemappedNW_011332687.1
NW_011332688.1Chr1|NW_011332688.11616RemappedNW_011332688.1
NW_012132914.1Chr1|NW_012132914.12938RemappedNW_012132914.1
NW_014040925.1Chr1|NW_014040925.111RemappedNW_014040925.1
NW_014040926.1Chr1|NW_014040926.11212RemappedNW_014040926.1
NW_014040927.1Chr1|NW_014040927.166RemappedNW_014040927.1
NW_015495298.1Chr1|NW_015495298.11416RemappedNW_015495298.1
NW_017852928.1Chr1|NW_017852928.12633RemappedNW_017852928.1
NW_018654706.1Chr1|NW_018654706.134RemappedNW_018654706.1
NW_018654707.1Chr1|NW_018654707.11821RemappedNW_018654707.1
NW_018654708.1Chr1|NW_018654708.166RemappedNW_018654708.1
NT_187522.1Chr2|NT_187522.123RemappedNT_187522.1
NT_187523.1Chr2|NT_187523.11721RemappedNT_187523.1
NT_187524.1Chr2|NT_187524.111RemappedNT_187524.1
NT_187525.1Chr2|NT_187525.145RemappedNT_187525.1
NT_187527.1Chr2|NT_187527.11418RemappedNT_187527.1
NT_187528.1Chr2|NT_187528.11725RemappedNT_187528.1
NT_187529.1Chr2|NT_187529.11619RemappedNT_187529.1
NT_187530.1Chr2|NT_187530.144RemappedNT_187530.1
NT_187531.1Chr2|NT_187531.122RemappedNT_187531.1
NT_187647.1Chr2|NT_187647.11721RemappedNT_187647.1
NT_187648.1Chr2|NT_187648.1911RemappedNT_187648.1
NW_003315908.1Chr2|NW_003315908.122RemappedNW_003315908.1
NW_003315909.1Chr2|NW_003315909.111RemappedNW_003315909.1
NW_003571033.2Chr2|NW_003571033.211RemappedNW_003571033.2
NW_011332689.1Chr2|NW_011332689.167RemappedNW_011332689.1
NW_011332690.1Chr2|NW_011332690.166RemappedNW_011332690.1
NW_012132915.1Chr2|NW_012132915.13140RemappedNW_012132915.1
NW_015495299.1Chr2|NW_015495299.133RemappedNW_015495299.1
NW_018654709.1Chr2|NW_018654709.122RemappedNW_018654709.1
NW_018654710.1Chr2|NW_018654710.122RemappedNW_018654710.1
NT_187678.1Chr3|NT_187678.12434RemappedNT_187678.1
NT_187688.1Chr3|NT_187688.12434RemappedNT_187688.1
NT_187689.1Chr3|NT_187689.12535RemappedNT_187689.1
NT_187690.1Chr3|NT_187690.12434RemappedNT_187690.1
NT_187691.1Chr3|NT_187691.12434RemappedNT_187691.1
NT_187532.1Chr3|NT_187532.12535RemappedNT_187532.1
NT_187534.1Chr3|NT_187534.156RemappedNT_187534.1
NT_187535.1Chr3|NT_187535.133RemappedNT_187535.1
NT_187536.1Chr3|NT_187536.1811RemappedNT_187536.1
NT_187537.1Chr3|NT_187537.11315RemappedNT_187537.1
NT_187538.1Chr3|NT_187538.144RemappedNT_187538.1
NT_187539.1Chr3|NT_187539.12327RemappedNT_187539.1
NT_187649.1Chr3|NT_187649.12434RemappedNT_187649.1
NW_003315913.1Chr3|NW_003315913.111RemappedNW_003315913.1
NW_003871060.2Chr3|NW_003871060.233RemappedNW_003871060.2
NW_009646197.1Chr3|NW_009646197.122RemappedNW_009646197.1
NW_009646198.1Chr3|NW_009646198.111RemappedNW_009646198.1
NW_011332691.1Chr3|NW_011332691.1910RemappedNW_011332691.1
NW_012132916.1Chr3|NW_012132916.122RemappedNW_012132916.1
NW_017363813.1Chr3|NW_017363813.133RemappedNW_017363813.1
NW_018654711.1Chr3|NW_018654711.155RemappedNW_018654711.1
NW_019805488.1Chr3|NW_019805488.199RemappedNW_019805488.1
NW_019805489.1Chr3|NW_019805489.167RemappedNW_019805489.1
NW_019805491.1Chr3|NW_019805491.111RemappedNW_019805491.1
NW_019805492.1Chr3|NW_019805492.133RemappedNW_019805492.1
NT_187679.1Chr4|NT_187679.11922RemappedNT_187679.1
NT_113793.3Chr4|NT_113793.3711RemappedNT_113793.3
NT_187540.1Chr4|NT_187540.133RemappedNT_187540.1
NT_187541.1Chr4|NT_187541.122RemappedNT_187541.1
NT_187542.1Chr4|NT_187542.166RemappedNT_187542.1
NT_187543.1Chr4|NT_187543.11012RemappedNT_187543.1
NT_187544.1Chr4|NT_187544.112RemappedNT_187544.1
NT_187545.1Chr4|NT_187545.145RemappedNT_187545.1
NT_187650.1Chr4|NT_187650.11518RemappedNT_187650.1
NW_003315914.1Chr4|NW_003315914.133RemappedNW_003315914.1
NW_003315915.1Chr4|NW_003315915.1811RemappedNW_003315915.1
NW_013171799.1Chr4|NW_013171799.122RemappedNW_013171799.1
NW_013171800.1Chr4|NW_013171800.122RemappedNW_013171800.1
NW_013171801.1Chr4|NW_013171801.168RemappedNW_013171801.1
NW_017363814.1Chr4|NW_017363814.145RemappedNW_017363814.1
NT_187546.1Chr5|NT_187546.168RemappedNT_187546.1
NT_187547.1Chr5|NT_187547.156RemappedNT_187547.1
NT_187548.1Chr5|NT_187548.11822RemappedNT_187548.1
NT_187549.1Chr5|NT_187549.111RemappedNT_187549.1
NT_187550.1Chr5|NT_187550.145RemappedNT_187550.1
NT_187651.1Chr5|NT_187651.15574RemappedNT_187651.1
NT_187652.1Chr5|NT_187652.1710RemappedNT_187652.1
NW_003315917.2Chr5|NW_003315917.25372RemappedNW_003315917.2
NW_003315919.1Chr5|NW_003315919.133RemappedNW_003315919.1
NW_003315920.1Chr5|NW_003315920.188RemappedNW_003315920.1
NW_003571036.1Chr5|NW_003571036.166RemappedNW_003571036.1
NW_009646199.1Chr5|NW_009646199.157RemappedNW_009646199.1
NW_016107297.1Chr5|NW_016107297.155RemappedNW_016107297.1
NW_016107298.1Chr5|NW_016107298.12326RemappedNW_016107298.1
NW_018654712.1Chr5|NW_018654712.111RemappedNW_018654712.1
NT_187692.1Chr6|NT_187692.111RemappedNT_187692.1
NT_187552.1Chr6|NT_187552.133RemappedNT_187552.1
NT_187553.1Chr6|NT_187553.11416RemappedNT_187553.1
NT_187555.1Chr6|NT_187555.123RemappedNT_187555.1
NT_187556.1Chr6|NT_187556.11417RemappedNT_187556.1
NT_187557.1Chr6|NT_187557.144RemappedNT_187557.1
NW_003315921.1Chr6|NW_003315921.111RemappedNW_003315921.1
NW_004166862.2Chr6|NW_004166862.278RemappedNW_004166862.2
NW_009646200.1Chr6|NW_009646200.166RemappedNW_009646200.1
NW_012132918.1Chr6|NW_012132918.144RemappedNW_012132918.1
NW_013171802.1Chr6|NW_013171802.123RemappedNW_013171802.1
NW_013171803.1Chr6|NW_013171803.111RemappedNW_013171803.1
NW_018654713.1Chr6|NW_018654713.189RemappedNW_018654713.1
NT_187558.1Chr7|NT_187558.12527RemappedNT_187558.1
NT_187559.1Chr7|NT_187559.188RemappedNT_187559.1
NT_187560.1Chr7|NT_187560.189RemappedNT_187560.1
NT_187561.1Chr7|NT_187561.1912RemappedNT_187561.1
NT_187562.1Chr7|NT_187562.15262RemappedNT_187562.1
NT_187563.1Chr7|NT_187563.158RemappedNT_187563.1
NT_187564.1Chr7|NT_187564.133RemappedNT_187564.1
NT_187653.1Chr7|NT_187653.12729RemappedNT_187653.1
NW_003315922.2Chr7|NW_003315922.211RemappedNW_003315922.2
NW_012132919.1Chr7|NW_012132919.134RemappedNW_012132919.1
NW_017852929.1Chr7|NW_017852929.133RemappedNW_017852929.1
NW_017852930.1Chr7|NW_017852930.188RemappedNW_017852930.1
NW_018654714.1Chr7|NW_018654714.11216RemappedNW_018654714.1
NW_018654715.1Chr7|NW_018654715.11114RemappedNW_018654715.1
NW_019805493.1Chr7|NW_019805493.177RemappedNW_019805493.1
NT_187680.1Chr8|NT_187680.11517RemappedNT_187680.1
NT_187565.1Chr8|NT_187565.12225RemappedNT_187565.1
NT_187566.1Chr8|NT_187566.178RemappedNT_187566.1
NT_187567.1Chr8|NT_187567.11319RemappedNT_187567.1
NT_187568.1Chr8|NT_187568.11012RemappedNT_187568.1
NT_187569.1Chr8|NT_187569.133RemappedNT_187569.1
NT_187570.1Chr8|NT_187570.15065RemappedNT_187570.1
NT_187571.1Chr8|NT_187571.11820RemappedNT_187571.1
NT_187572.1Chr8|NT_187572.144RemappedNT_187572.1
NT_187573.1Chr8|NT_187573.157RemappedNT_187573.1
NT_187574.1Chr8|NT_187574.155RemappedNT_187574.1
NT_187576.1Chr8|NT_187576.17178RemappedNT_187576.1
NT_187577.1Chr8|NT_187577.11314RemappedNT_187577.1
NT_187654.1Chr8|NT_187654.12327RemappedNT_187654.1
NT_187655.1Chr8|NT_187655.145RemappedNT_187655.1
NW_017852931.1Chr8|NW_017852931.133RemappedNW_017852931.1
NW_017852932.1Chr8|NW_017852932.145RemappedNW_017852932.1
NW_018654716.1Chr8|NW_018654716.11719RemappedNW_018654716.1
NW_018654717.1Chr8|NW_018654717.1230270RemappedNW_018654717.1
NW_019805494.1Chr8|NW_019805494.134RemappedNW_019805494.1
NT_187578.1Chr9|NT_187578.135RemappedNT_187578.1
NW_003315929.1Chr9|NW_003315929.134RemappedNW_003315929.1
NW_003315930.1Chr9|NW_003315930.133RemappedNW_003315930.1
NW_003315931.1Chr9|NW_003315931.145RemappedNW_003315931.1
NW_009646201.1Chr9|NW_009646201.11216RemappedNW_009646201.1
NW_013171804.1Chr9|NW_013171804.122RemappedNW_013171804.1
NW_013171805.1Chr9|NW_013171805.11112RemappedNW_013171805.1
NT_187579.1Chr10|NT_187579.155RemappedNT_187579.1
NT_187580.1Chr10|NT_187580.111RemappedNT_187580.1
NW_003315934.1Chr10|NW_003315934.11313RemappedNW_003315934.1
NW_003315935.1Chr10|NW_003315935.155RemappedNW_003315935.1
NW_009646202.1Chr10|NW_009646202.166RemappedNW_009646202.1
NW_013171806.1Chr10|NW_013171806.12228RemappedNW_013171806.1
NW_013171807.1Chr10|NW_013171807.199RemappedNW_013171807.1
NT_187681.1Chr11|NT_187681.11416RemappedNT_187681.1
NT_187656.1Chr11|NT_187656.188RemappedNT_187656.1
NT_187657.1Chr11|NT_187657.155RemappedNT_187657.1
NT_187581.1Chr11|NT_187581.12428RemappedNT_187581.1
NT_187582.1Chr11|NT_187582.111RemappedNT_187582.1
NT_187583.1Chr11|NT_187583.11212RemappedNT_187583.1
NT_187584.1Chr11|NT_187584.188RemappedNT_187584.1
NT_187585.1Chr11|NT_187585.177RemappedNT_187585.1
NT_187586.1Chr11|NT_187586.11818RemappedNT_187586.1
NW_003315936.1Chr11|NW_003315936.145RemappedNW_003315936.1
NW_003871073.1Chr11|NW_003871073.111RemappedNW_003871073.1
NW_003871074.1Chr11|NW_003871074.111RemappedNW_003871074.1
NW_009646203.1Chr11|NW_009646203.188RemappedNW_009646203.1
NW_011332695.1Chr11|NW_011332695.11212RemappedNW_011332695.1
NW_013171808.1Chr11|NW_013171808.122RemappedNW_013171808.1
NW_015148966.1Chr11|NW_015148966.11012RemappedNW_015148966.1
NW_017363816.1Chr11|NW_017363816.122RemappedNW_017363816.1
NW_019805495.1Chr11|NW_019805495.11112RemappedNW_019805495.1
NW_019805496.1Chr11|NW_019805496.177RemappedNW_019805496.1
NW_019805497.1Chr11|NW_019805497.11213RemappedNW_019805497.1
NW_019805498.1Chr11|NW_019805498.122RemappedNW_019805498.1
NT_187658.1Chr12|NT_187658.13033RemappedNT_187658.1
NT_187587.1Chr12|NT_187587.11927RemappedNT_187587.1
NT_187588.1Chr12|NT_187588.122RemappedNT_187588.1
NT_187589.1Chr12|NT_187589.167RemappedNT_187589.1
NT_187590.1Chr12|NT_187590.123RemappedNT_187590.1
NT_187591.1Chr12|NT_187591.134RemappedNT_187591.1
NW_003315939.2Chr12|NW_003315939.222RemappedNW_003315939.2
NW_003315940.1Chr12|NW_003315940.134RemappedNW_003315940.1
NW_003315941.1Chr12|NW_003315941.111RemappedNW_003315941.1
NW_003315942.2Chr12|NW_003315942.245RemappedNW_003315942.2
NW_003571049.1Chr12|NW_003571049.11518RemappedNW_003571049.1
NW_003571050.1Chr12|NW_003571050.12223RemappedNW_003571050.1
NW_009646204.1Chr12|NW_009646204.167RemappedNW_009646204.1
NW_011332696.1Chr12|NW_011332696.11617RemappedNW_011332696.1
NW_013171809.1Chr12|NW_013171809.122RemappedNW_013171809.1
NW_015148967.1Chr12|NW_015148967.199RemappedNW_015148967.1
NW_018654718.1Chr12|NW_018654718.12424RemappedNW_018654718.1
NW_018654719.1Chr12|NW_018654719.111RemappedNW_018654719.1
NW_018654720.1Chr12|NW_018654720.155RemappedNW_018654720.1
NW_019805499.1Chr12|NW_019805499.166RemappedNW_019805499.1
NT_187592.1Chr13|NT_187592.146RemappedNT_187592.1
NT_187593.1Chr13|NT_187593.122RemappedNT_187593.1
NT_187594.1Chr13|NT_187594.11010RemappedNT_187594.1
NT_187595.1Chr13|NT_187595.111RemappedNT_187595.1
NT_187597.1Chr13|NT_187597.122RemappedNT_187597.1
NW_011332698.1Chr13|NW_011332698.11417RemappedNW_011332698.1
NW_011332699.1Chr13|NW_011332699.167RemappedNW_011332699.1
NW_013171811.1Chr13|NW_013171811.123RemappedNW_013171811.1
NT_113796.3Chr14|NT_113796.356RemappedNT_113796.3
NT_187599.1Chr14|NT_187599.144RemappedNT_187599.1
NT_187600.1Chr14|NT_187600.1158197RemappedNT_187600.1
NT_187601.1Chr14|NT_187601.12829RemappedNT_187601.1
NW_018654721.1Chr14|NW_018654721.133RemappedNW_018654721.1
NW_018654722.1Chr14|NW_018654722.13137RemappedNW_018654722.1
NT_187659.1Chr15|NT_187659.12331RemappedNT_187659.1
NT_187660.1Chr15|NT_187660.1120141RemappedNT_187660.1
NT_187603.1Chr15|NT_187603.12736RemappedNT_187603.1
NT_187604.1Chr15|NT_187604.12734RemappedNT_187604.1
NT_187605.1Chr15|NT_187605.11719RemappedNT_187605.1
NT_187606.1Chr15|NT_187606.12834RemappedNT_187606.1
NW_003315943.1Chr15|NW_003315943.12232RemappedNW_003315943.1
NW_003315944.2Chr15|NW_003315944.211RemappedNW_003315944.2
NW_011332701.1Chr15|NW_011332701.1145172RemappedNW_011332701.1
NT_187607.1Chr16|NT_187607.16379RemappedNT_187607.1
NT_187608.1Chr16|NT_187608.155RemappedNT_187608.1
NT_187609.1Chr16|NT_187609.111RemappedNT_187609.1
NT_187610.1Chr16|NT_187610.188RemappedNT_187610.1
NW_003315945.1Chr16|NW_003315945.178RemappedNW_003315945.1
NW_003315946.1Chr16|NW_003315946.111RemappedNW_003315946.1
NW_012132921.1Chr16|NW_012132921.166RemappedNW_012132921.1
NW_013171812.1Chr16|NW_013171812.122RemappedNW_013171812.1
NW_013171813.1Chr16|NW_013171813.144RemappedNW_013171813.1
NW_017852933.1Chr16|NW_017852933.14049RemappedNW_017852933.1
NW_018654723.1Chr16|NW_018654723.133RemappedNW_018654723.1
NW_019805500.1Chr16|NW_019805500.167RemappedNW_019805500.1
NT_187661.1Chr17|NT_187661.15471RemappedNT_187661.1
NT_187662.1Chr17|NT_187662.11720RemappedNT_187662.1
NT_187663.1Chr17|NT_187663.16182RemappedNT_187663.1
NT_187664.1Chr17|NT_187664.168RemappedNT_187664.1
NW_003871093.1Chr17|NW_003871093.11011RemappedNW_003871093.1
NT_167251.2Chr17|NT_167251.222RemappedNT_167251.2
NT_187611.1Chr17|NT_187611.11213RemappedNT_187611.1
NT_187612.1Chr17|NT_187612.11617RemappedNT_187612.1
NT_187613.1Chr17|NT_187613.12226RemappedNT_187613.1
NT_187614.1Chr17|NT_187614.1122157RemappedNT_187614.1
NT_187616.1Chr17|NT_187616.122RemappedNT_187616.1
NW_003315952.3Chr17|NW_003315952.33338RemappedNW_003315952.3
NW_003315953.2Chr17|NW_003315953.266RemappedNW_003315953.2
NW_003315954.1Chr17|NW_003315954.111RemappedNW_003315954.1
NW_003315955.1Chr17|NW_003315955.145RemappedNW_003315955.1
NW_003871091.1Chr17|NW_003871091.12021RemappedNW_003871091.1
NW_003871092.1Chr17|NW_003871092.189RemappedNW_003871092.1
NW_016107299.1Chr17|NW_016107299.178RemappedNW_016107299.1
NW_017363817.1Chr17|NW_017363817.11516RemappedNW_017363817.1
NW_017363818.1Chr17|NW_017363818.133RemappedNW_017363818.1
NW_017363819.1Chr17|NW_017363819.11218RemappedNW_017363819.1
NW_019805501.1Chr17|NW_019805501.122RemappedNW_019805501.1
NT_187665.1Chr18|NT_187665.11718RemappedNT_187665.1
NT_187666.1Chr18|NT_187666.1710RemappedNT_187666.1
NT_187617.1Chr18|NT_187617.145RemappedNT_187617.1
NT_187618.1Chr18|NT_187618.122RemappedNT_187618.1
NW_003315956.1Chr18|NW_003315956.156RemappedNW_003315956.1
NW_003315957.1Chr18|NW_003315957.167RemappedNW_003315957.1
NW_003315958.1Chr18|NW_003315958.11213RemappedNW_003315958.1
NW_003315959.1Chr18|NW_003315959.134RemappedNW_003315959.1
NW_003315960.1Chr18|NW_003315960.122RemappedNW_003315960.1
NW_003315961.1Chr18|NW_003315961.1710RemappedNW_003315961.1
NW_013171814.1Chr18|NW_013171814.133RemappedNW_013171814.1
NW_014040928.1Chr18|NW_014040928.145RemappedNW_014040928.1
NW_018654724.1Chr18|NW_018654724.122RemappedNW_018654724.1
NW_019805502.1Chr18|NW_019805502.111RemappedNW_019805502.1
NW_019805503.1Chr18|NW_019805503.133RemappedNW_019805503.1
NT_187693.1Chr19|NT_187693.1140177RemappedNT_187693.1
NW_003571061.2Chr19|NW_003571061.27292RemappedNW_003571061.2
NW_003571057.2Chr19|NW_003571057.24454RemappedNW_003571057.2
NW_003571058.2Chr19|NW_003571058.24454RemappedNW_003571058.2
NW_003571059.2Chr19|NW_003571059.24454RemappedNW_003571059.2
NW_003571060.1Chr19|NW_003571060.183104RemappedNW_003571060.1
NW_003571056.2Chr19|NW_003571056.24454RemappedNW_003571056.2
NW_003571055.2Chr19|NW_003571055.25874RemappedNW_003571055.2
NT_187619.1Chr19|NT_187619.122RemappedNT_187619.1
NT_187620.1Chr19|NT_187620.179RemappedNT_187620.1
NT_187621.1Chr19|NT_187621.188RemappedNT_187621.1
NT_187622.1Chr19|NT_187622.145RemappedNT_187622.1
NW_003315962.1Chr19|NW_003315962.11415RemappedNW_003315962.1
NW_003315963.1Chr19|NW_003315963.188RemappedNW_003315963.1
NW_003315964.2Chr19|NW_003315964.2810RemappedNW_003315964.2
NW_003315965.1Chr19|NW_003315965.166RemappedNW_003315965.1
NW_003571054.1Chr19|NW_003571054.194119RemappedNW_003571054.1
NW_009646206.1Chr19|NW_009646206.12933RemappedNW_009646206.1
NW_014040929.1Chr19|NW_014040929.11111RemappedNW_014040929.1
NT_187623.1Chr20|NT_187623.135RemappedNT_187623.1
NT_187624.1Chr20|NT_187624.179RemappedNT_187624.1
NW_003315966.2Chr20|NW_003315966.233RemappedNW_003315966.2
NT_187626.1Chr21|NT_187626.156RemappedNT_187626.1
NT_187627.1Chr21|NT_187627.123RemappedNT_187627.1
NT_187628.1Chr21|NT_187628.145RemappedNT_187628.1
NW_003315968.2Chr21|NW_003315968.289RemappedNW_003315968.2
NW_003315969.2Chr21|NW_003315969.211RemappedNW_003315969.2
NW_003315970.2Chr21|NW_003315970.211RemappedNW_003315970.2
NT_187682.1Chr22|NT_187682.11216RemappedNT_187682.1
NW_015148969.1Chr22|NW_015148969.167RemappedNW_015148969.1
NT_187386.1Chr22|NT_187386.112RemappedNT_187386.1
NT_187629.1Chr22|NT_187629.11619RemappedNT_187629.1
NT_187630.1Chr22|NT_187630.122RemappedNT_187630.1
NT_187632.1Chr22|NT_187632.1910RemappedNT_187632.1
NT_187633.1Chr22|NT_187633.13545RemappedNT_187633.1
NW_003315972.2Chr22|NW_003315972.255RemappedNW_003315972.2
NT_187667.1ChrX|NT_187667.11112RemappedNT_187667.1
NT_187634.1ChrX|NT_187634.11112RemappedNT_187634.1
NT_187635.1ChrX|NT_187635.133RemappedNT_187635.1
NW_009646209.1ChrY|NW_009646209.11014RemappedNW_009646209.1
Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.10Chr14,4565,039SubmittedNC_000001.10
NC_000002.11Chr24,3994,849SubmittedNC_000002.11
NC_000003.11Chr33,2193,555SubmittedNC_000003.11
NC_000004.11Chr43,4053,776SubmittedNC_000004.11
NC_000005.9Chr53,1883,558SubmittedNC_000005.9
NC_000006.11Chr63,2643,587SubmittedNC_000006.11
NC_000007.13Chr73,2083,540SubmittedNC_000007.13
NC_000008.10Chr82,8893,179SubmittedNC_000008.10
NC_000009.11Chr92,6112,930SubmittedNC_000009.11
NC_000010.10Chr102,5412,811SubmittedNC_000010.10
NC_000011.9Chr112,6882,954SubmittedNC_000011.9
NC_000012.11Chr122,5942,846SubmittedNC_000012.11
NC_000013.10Chr131,7511,926SubmittedNC_000013.10
NC_000014.8Chr141,8752,083SubmittedNC_000014.8
NC_000015.9Chr151,9362,253SubmittedNC_000015.9
NC_000016.9Chr162,2572,563SubmittedNC_000016.9
NC_000017.10Chr172,0182,325SubmittedNC_000017.10
NC_000018.9Chr181,3371,463SubmittedNC_000018.9
NC_000019.9Chr192,1032,445SubmittedNC_000019.9
NC_000020.10Chr201,1901,297SubmittedNC_000020.10
NC_000021.8Chr21669766SubmittedNC_000021.8
NC_000022.10Chr221,1531,314SubmittedNC_000022.10
NC_000023.10ChrX9241,015SubmittedNC_000023.10

Variant Region remap statusVariant Call remap status
Sequence IDChrVariant Regions on sourcePerfectGoodPassFailMultVariant Calls on sourcePerfectGoodPassFailMult
NC_000001.10Chr14,4563,95520859381965,0394,4332428152231
NC_000002.11Chr24,3994,155771451484,8494,54692197185
NC_000003.11Chr33,2193,04941201273,5553,3594330150
NC_000004.11Chr43,4053,2874520713,7763,629582087
NC_000005.9Chr53,1883,00422101613,5583,3342410199
NC_000006.11Chr63,2643,13940116683,5873,4484313677
NC_000007.13Chr73,2082,935961891503,5403,2161152311175
NC_000008.10Chr82,8892,39828724543,1792,61129102527
NC_000009.11Chr92,6112,462434718412,9302,73355642652
NC_000010.10Chr102,5412,379523811612,8112,60963531967
NC_000011.9Chr112,6882,50438741352,9542,7594074144
NC_000012.11Chr122,5942,42312221552,8462,6501424176
NC_000013.10Chr131,7511,696965351,9261,86197841
NC_000014.8Chr141,8751,545752382242,0831,685873011270
NC_000015.9Chr151,9361,640401712382,2531,88751262287
NC_000016.9Chr162,2572,078171411472,5632,34419242174
NC_000017.10Chr172,0181,635271943332,3251,86431224404
NC_000018.9Chr181,3371,2601431591,4631,375154168
NC_000019.9Chr192,1031,86641811872,4452,1605291223
NC_000020.10Chr201,1901,1601223131,2971,259134417
NC_000021.8Chr21669597432027766684464032
NC_000022.10Chr221,1539631011615581,3141,081116242469
NC_000023.10ChrX924815681314141,01588774201915

Samplesets

Number of Samplesets: 1

Name:
CNV_consensus_set_DECIPHER
Size:
0 (sample data not available)
Organisms:
Homo sapiens
Sampleset Phenotype(s):
None reported

Experimental Details

Experiment IDTypeData SourceMethodAnalysisNumber of Variant Calls
1Discovery1G del genotypedCuratedCurated14,130
2Discovery42M callsCuratedCurated12,151
3Discovery42M genotypedCuratedCurated4,637
4DiscoveryAffy6CuratedCurated11,936
5DiscoveryControls_DDD_custom_2MarrayCuratedCurated19,220

Validations

No validation data were submitted for this study.

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