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3F27:
Structure of Sox17 Bound to DNA
PDB ID:
3F27
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MMDB ID:
70700
PDB Deposition Date:
2008/10/29
Updated in MMDB:
2023/11
Experimental Method:
x-ray diffraction
Resolution:
2.75 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
A, B
Mus musculus
D
Similar Structures:
VAST+
Download sequence data
Molecular Components in 3F27
Label
Count
Molecule
Protein (1 molecule)
D
1
Transcription Factor Sox-17
Nucleotides(2 molecules)
A
1
DNA (5'-d(*dgp*dtp*dcp*dtp*dcp*dtp*dap*dtp*dtp*dgp*dtp*dcp*dcp*dtp*dgp*dg)-3')
B
1
DNA (5'-d(*dcp*dcp*dap*dgp*dgp*dap*dcp*dap*dap*dtp*dap*dgp*dap*dgp*dap*dc)-3')
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303