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4R8P:
Crystal structure of the Ring1B/Bmi1/UbcH5c PRC1 ubiquitylation module bound to the nucleosome core particle
PDB ID:
4R8P
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MMDB ID:
124524
PDB Deposition Date:
2014/9/2
Updated in MMDB:
2014/11
Experimental Method:
x-ray diffraction
Resolution:
3.2846 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
I, J
Homo sapiens
K, L, M, N
Xenopus laevis
A, B, C, D, E, F, G, H
Similar Structures:
VAST+
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Biological Unit for 4R8P: 14-meric; determined by author
Molecular Components in 4R8P
Label
Count
Molecule
Proteins (12 molecules)
A
E
2
Histone H3.2
B
F
2
Histone H4
C
G
2
Histone H2A
D
H
2
Histone H2B 1.1
K
M
2
Polycomb Complex Protein Bmi-1
L
N
2
E3 Ubiquitin-protein Ligase Ring2, Ubiquitin-conjugating Enzyme E2 D3
Nucleotides(2 molecules)
I
1
DNA (147-mer)
J
1
DNA (147-mer)
Chemicals and Non-standard biopolymers (8 molecules)
1
8
ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303