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7PNQ:
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 43E6 antibody Fab fragment
PDB ID:
7PNQ
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MMDB ID:
214531
PDB Deposition Date:
2021/9/7
Updated in MMDB:
2022/11
Experimental Method:
electron microscopy
Resolution:
3.7 Å
Source Organism:
Human coronavirus OC43
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Taxonomy
Molecule
Human coronavirus OC43
C, A, B
Homo sapiens
X, Y, H, L, D, F
Similar Structures:
VAST+
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Biological Unit for 7PNQ: nonameric; determined by author
Molecular Components in 7PNQ
Label
Count
Molecule
Proteins (9 molecules)
X
H
D
3
43e6 Antibody Heavy Chain
Y
L
F
3
43e6 Antibody Light Chain
C
A
B
3
Spike Glycoprotein
Chemicals and Non-standard biopolymers (15 molecules)
1
15
2-acetamido-2-deoxy-beta-D-glucopyranose
(Link to PubChem not yet available)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303