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SRX2011659: Genome sequencing of Golovinomyces cichoracearum UMSG1: spores
1 ILLUMINA (Illumina HiSeq 1500) run: 46.8M spots, 9.4G bases, 5.7Gb downloads

Design: Golovinomyces cichoracearum UMSG1 is one of the four dicot powdery mildew we sequenced. The genomic DNA is extracted from spores. Raw sequencing reads are included here.
Submitted by: University of Maryland
Study: Genome sequencing and assembly of four powdery mildew biotypes - Golovinomyces cichoracearum UMSG1
show Abstracthide Abstract
Powdery mildew (PM) is one of the most important and widespread plant diseases caused by obligate biotrophic Ascomycete fungi in the order of Erysiphales. Monocot PM fungi such as Blumeria graminis f.sp. hordei (Bgh) infectious on barley and B. graminis f.sp. tritici (Bgt) infectious on wheat exhibit high-level of host-specialization. By contrast, many dicot PM fungi display rather broad host ranges. To understand why different PM fungi adopt distinct modes of host-adaption, we sequenced the genomes of four dicot PM strains belonging to Golovinomyces cichoracearum (GcC1, GcM1, GcM3) or Oidium neolycopersici (OnM2) and conducted comparative sequence analyses. This bioproject included the sequencing and assembly information of GcM1 which is found on sow thistle plants grown on the Shady Grove campus of University of Maryland.
Sample: Golovinomyces cichoracearum UMSG1 (Sow thistle powdery mildew)
SAMN05414051 • SRS1609001 • All experiments • All runs
Library:
Name: GcUMSG1
Instrument: Illumina HiSeq 1500
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: PAIRED
Runs: 1 run, 46.8M spots, 9.4G bases, 5.7Gb
Run# of Spots# of BasesSizePublished
SRR401787346,771,1049.4G5.7Gb2018-01-01

ID:
2895628

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