U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX23121295: Fungal leaf endophyte of Zamia amplicon sequencing using the ITS1 region
1 ILLUMINA (Illumina MiSeq) run: 53,422 spots, 26.8M bases, 15.2Mb downloads

Design: The amplicon sequencing library was prepared with a two-step dual-indexed PCR approach
Submitted by: Laval University
Study: Phyllosphere of Zamia species from Panama
PRJNA1061598 • SRP482161 • All experiments • All runs
show Abstracthide Abstract
The data deposited in this project serve to investigate how plant-microbe interactions mediate secondary metabolic composition on the leaf of Zamia species from Panama. Using an "omics approach we characterized the leaf endophytic microbial, bacteria 16S ARN, and fungi ITS1, community alpha- and beta-diversity in two phylogenetically related Zamia species with contrasting habitats, terrestrial vs epiphytic, and relate specific leaf endophytes to host phytochemicals.
Sample:
SAMN39285991 • SRS20074847 • All experiments • All runs
Organism: Zamia nana
Library:
Name: PA182507
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 53,422 spots, 26.8M bases, 15.2Mb
Run# of Spots# of BasesSizePublished
SRR2744951853,42226.8M15.2Mb2024-01-07

ID:
31240035

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...