Whole shotgun sequencing of Pantoea nevamicus: pure culture - SRA

SRX8399479: Whole shotgun sequencing of Pantoea nevamicus: pure culture
1 ILLUMINA (NextSeq 550) run: 3.4M spots, 864.1M bases, 391.5Mb downloads

Design: Bacterial DNA was extracted using the QIAGEN blood and tissue kit. And the library was prepared using a single library preparation method based upon the Illumina Nextera kit series by "The Microbial Genome Sequencing Center" private sequencing company.

Submitted by: Baylor College of Medicine

Study: CeMbio Microbial Genomes and Sequencing Reads

PRJNA624308 • SRP264777 • All experiments • All runs

show Abstracthide Abstract

Here we introduce CeMbio, a simplified natural Caenorhabditis elegans microbiota derived from our meta-analysis of the natural microbiome of this nematode. The CeMbio resource is amenable to all strengths of the C. elegans model system, strains included are readily culturable, they all colonize the worm gut individually, and comprise a robust community that distinctly affects nematode life-history. This BioProject includes all information related to the single bacteria genome assembly and sequencing.

Sample: Pantoea nemavictus - BIGb0393

SAMN14598232 • SRS6712261 • All experiments • All runs

Organism: Pantoea nemavictus

Library:

Name: BIGb0393

Instrument: NextSeq 550

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 3.4M spots, 864.1M bases, 391.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR11849221	3,435,956	864.1M	391.5Mb	2021-06-01

ID:: 10918519

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Sequence Read Archive

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