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ERX1046208: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 757.1M bases, 421.8Mb downloads

Submitted by: Universitetsparken 15
Study: Draft genome of Arthrobacter antarcticus W2
show Abstracthide Abstract
Here we present a draft genome of Arthrobacter antarcticus W2. The strain was isolated from a wall in small Danish Slaughterhouse. We have in a recent publication shown how this strain can be involved in synergistic biofilm formation with other bacterial species isolated from the same environment. Genome sequencing libraries were prepared using the Nextera XT kit (Illumina, USA), according to the manufacturer’s recommendations, followed by sequencing as a part of the flowcell, as 2 × 250-base paired-end reads using the Illumina MiSeq (Illumina, USA) technology. The reads were cleaned and trimmed using CLC Genomics Workbench 7 (CLC bio, Denmark). Cleaned reads were assembled using SPAdes v 3.5.0. Obtained contigs were analyzed by VecScreen, to ensure no primer, phage or transposase contamination occurred in the contigs. Contigs smaller than 500bp were discarded.
Sample: Draft genome of Arthrobacter antarcticus W2
SAMEA3490269 • ERS797418 • All experiments • All runs
Library:
Name: unspecified
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 1.3M spots, 757.1M bases, 421.8Mb
Run# of Spots# of BasesSizePublished
ERR9692501,257,719757.1M421.8Mb2016-02-02

ID:
2202225

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