U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX2624882: Rhizobiaceae bacterium UBA3490
1 ILLUMINA (Illumina HiSeq 2500) run: 16,986 spots, 521,620 bases, 273,752b downloads

Design: BWA (BWA-MEM) mapping of Rhizobiaceae bacterium UBA3490 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 13.04
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Rhizobiaceae bacterium UBA3490 genome recovered from SRX823344
SAMN06457114 • SRS2034839 • All experiments • All runs
Library:
Name: SRX823344.b21.bam
Instrument: Illumina HiSeq 2500
Strategy: OTHER
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 16,986 spots, 521,620 bases, 273,752b
Run# of Spots# of BasesSizePublished
SRR532568716,986521,620273,752b2017-09-14

ID:
3801028

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...