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Uncultivated Rhizobiaceae bacterium UBA3490 genome recovered from SRX823344

Identifiers
BioSample: SAMN06457114; Sample name: Rhizobiaceae bacterium UBA3490; SRA: SRS2034839
Organism
Rhizobiaceae bacterium UBA3490
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; unclassified Rhizobiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3490
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823344 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated86.80%
contamination_estimated2.06%
environmental_sampletrue
genome_coverage13.04
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749961.
Description

Uncultivated genome recovered from an assembly of the SRX823344 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457114
ID:
6457114

BioProject SRA Nucleotide

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