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    CANF2 minor allergen Can f 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 403829, updated on 22-Jan-2024

    Summary

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    Gene symbol
    CANF2
    Gene description
    minor allergen Can f 2
    See related
    Ensembl:ENSCAFG00845008996
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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    Genomic context

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    See CANF2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (50496889..50501021, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (48870351..48874151, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (49619687..49623671, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (49277056..49280856, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (49571339..49575352, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene potassium sodium-activated channel subfamily T member 1 Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 1 Neighboring gene lipocalin 9 Neighboring gene glycosyltransferase 6 domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Production, crystallization and preliminary X-ray diffraction analysis of the allergen Can f 2 from Canis familiaris. Madhurantakam C, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2009 May 1. PMID 19407378, Free PMC Article
    2. Dog dander. Weber RW. Ann Allergy Asthma Immunol, 2007 Mar. PMID 17378249
    3. Characterization of dog allergens Can f 1 and Can f 2. 2. A comparison of Can f 1 with Can f 2 regarding their biochemical and immunological properties. Kamata Y, et al. Int Arch Allergy Immunol, 2007. PMID 17135761
    4. Characterization of dog allergens Can f 1 and Can f 2. 1. Preparation of their recombinant proteins and antibodies. Kamata Y, et al. Int Arch Allergy Immunol, 2007. PMID 17135760
    5. Assessment of recombinant dog allergens Can f 1 and Can f 2 for the diagnosis of dog allergy. Saarelainen S, et al. Clin Exp Allergy, 2004 Oct. PMID 15479273

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The production, isolation, crystallization and preliminary X-ray diffraction analysis of two crystal forms of recombinant dog allergen Can f 2 are reported.
      Title: Production, crystallization and preliminary X-ray diffraction analysis of the allergen Can f 2 from Canis familiaris.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    minor allergen Can f 2
    Names
    allergen Dog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003189.2 → NP_001003189.1  minor allergen Can f 2 precursor

      See identical proteins and their annotated locations for NP_001003189.1

      Status: VALIDATED

      Source sequence(s)
      AF027178
      UniProtKB/Swiss-Prot
      O18874
      UniProtKB/TrEMBL
      A0A8C0JIF8
      Related
      ENSCAFP00845012369.1, ENSCAFT00845015896.1
      Conserved Domains (1) summary
      pfam00061
      Location:34 → 173
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      50496889..50501021 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038674961.1 → XP_038530889.1  minor allergen Can f 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0M0M1
      Conserved Domains (1) summary
      cd19431
      Location:72 → 232
      lipocalin_Can_f_2; Minor allergen Can f 2

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      49277056..49280856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      49571339..49575352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      49619687..49623671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48870351..48874151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O18874.1 GenPept UniProtKB/Swiss-Prot:O18874

    Gene LinkOut

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