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    mpzl3.L myelin protein zero like 3 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379105, updated on 4-Nov-2024

    Summary

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    Official Symbol
    mpzl3.L
    Official Full Name
    myelin protein zero like 3 L homeolog
    Primary source
    Xenbase:XB-GENE-6078905
    Locus tag
    XELAEV_18035437mg
    See related
    EnsemblRapid:ENSXLAG00005013831 AllianceGenome:Xenbase:XB-GENE-6078905
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    mpzl3
    Summary
    Predicted to act upstream of or within cell adhesion. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in lung cancer. Orthologous to human MPZL3 (myelin protein zero like 3). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See mpzl3.L in Genome Data Viewer
    Location:
    chromosome: 7L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (82898630..82915777)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (74327097..74341581)

    Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene CD3e molecule L homeolog Neighboring gene myelin protein zero-like 2 L homeolog Neighboring gene sodium voltage-gated channel beta subunit 2 L homeolog Neighboring gene uncharacterized LOC121395544 Neighboring gene sodium voltage-gated channel beta subunit 4 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC52777

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    myelin protein zero-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001085949.1 → NP_001079418.1  myelin protein zero-like protein 3 precursor

      See identical proteins and their annotated locations for NP_001079418.1

      Status: PROVISIONAL

      Source sequence(s)
      BC041735
      UniProtKB/Swiss-Prot
      Q8AVM3
      UniProtKB/TrEMBL
      A0A974CFQ5
      Related
      ENSXLAP00005040827.1, ENSXLAT00005041752.1
      Conserved Domains (2) summary
      smart00410
      Location:27 → 132
      IG_like; Immunoglobulin like
      cl11960
      Location:26 → 132
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      82898630..82915777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041568354.1 → XP_041424288.1  myelin protein zero-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8J1L428
      Related
      ENSXLAP00005040822.1, ENSXLAT00005041747.1
      Conserved Domains (1) summary
      smart00406
      Location:22 → 105
      IGv; Immunoglobulin V-Type

    2. XM_041568353.1 → XP_041424287.1  myelin protein zero-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J1L413
      Related
      ENSXLAP00005040832.1, ENSXLAT00005041758.1
      Conserved Domains (1) summary
      smart00406
      Location:38 → 121
      IGv; Immunoglobulin V-Type
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8AVM3.1 GenPept UniProtKB/Swiss-Prot:Q8AVM3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.