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    LAMA1 laminin subunit alpha 1 [ Onychostruthus taczanowskii (white-rumped snowfinch) ]

    Gene ID: 121333141, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LAMA1
    Gene description
    laminin subunit alpha 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onychostruthus taczanowskii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus
    Orthologs
    human mouse all
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    Genomic context

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    See LAMA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    63
    Annotation release Status Assembly Chr Location
    100 current ASM1759005v1 (GCF_017590055.1) Unplaced Scaffold NW_024498795.1 (7141027..7238129)

    NW_024498795.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type M Neighboring gene leucine rich repeat containing 30 Neighboring gene Rho GTPase activating protein 28 Neighboring gene transmembrane protein 200C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024498795 Unplaced Scaffold Reference ASM1759005v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in blood vessel morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in camera-type eye development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of embryonic development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laminin subunit alpha-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Onychostruthus taczanowskii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1759005v1 Primary Assembly

    Genomic

    1. NW_024498795.1 Reference ASM1759005v1 Primary Assembly

      Range
      7141027..7238129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041399219.1 → XP_041255153.1  laminin subunit alpha-1

      Conserved Domains (10) summary
      smart00136
      Location:24 → 276
      LamNT; Laminin N-terminal domain (domain VI)
      smart00180
      Location:959 → 1003
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      smart00281
      Location:1223 → 1352
      LamB; Laminin B domain
      smart00282
      Location:2154 → 2293
      LamG; Laminin G domain
      cd00055
      Location:1516 → 1554
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      cd00110
      Location:2320 → 2476
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam06008
      Location:1584 → 1834
      Laminin_I; Laminin Domain I
      pfam06009
      Location:2024 → 2158
      Laminin_II; Laminin Domain II
      cl02488
      Location:1889 → 2108
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl02548
      Location:575 → 702
      Laminin_B; Laminin B (Domain IV)
    Nucleotide Protein
    Heading Accession and Version

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