U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CASP2 caspase 2 [ Strigops habroptila (Kakapo) ]

    Gene ID: 115601597, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CASP2
    Gene description
    caspase 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CASP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) 2 NC_044278.2 (12920576..12941795)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 2 Unlocalized Scaffold NW_022045570.1 (12920576..12941795)

    Chromosome 2 - NC_044278.2Genomic Context describing neighboring genes Neighboring gene rap1 GTPase-activating protein 1-like Neighboring gene transmembrane protein 139 Neighboring gene chloride voltage-gated channel 1 Neighboring gene family with sequence similarity 131 member B Neighboring gene zyxin

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    caspase-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_044278.2 Reference bStrHab1.2.pri

      Range
      12920576..12941795
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030471837.1 → XP_030327697.1  caspase-2 isoform X1

      UniProtKB/TrEMBL
      A0A672UK95
      Conserved Domains (2) summary
      cd00032
      Location:158 → 413
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2

    2. XM_030471844.1 → XP_030327704.1  caspase-2 isoform X6

      Conserved Domains (2) summary
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2
      cl00042
      Location:159 → 340
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

    3. XM_030471841.1 → XP_030327701.1  caspase-2 isoform X4

      Conserved Domains (2) summary
      cd00032
      Location:151 → 354
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2

    4. XM_030471840.1 → XP_030327700.1  caspase-2 isoform X3

      Conserved Domains (2) summary
      cd00032
      Location:102 → 357
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
      cl14633
      Location:1 → 44
      DD; Death Domain Superfamily of protein-protein interaction domains

    5. XM_030471839.1 → XP_030327699.1  caspase-2 isoform X2

      Conserved Domains (2) summary
      cd00032
      Location:158 → 381
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2

    6. XM_030471843.1 → XP_030327703.1  caspase-2 isoform X5

      Conserved Domains (2) summary
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2
      cl00042
      Location:159 → 290
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

    7. XM_030471842.1 → XP_030327702.1  caspase-2 isoform X5

      Conserved Domains (2) summary
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2
      cl00042
      Location:159 → 290
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

    8. XM_030471838.1 → XP_030327698.1  caspase-2 isoform X1

      UniProtKB/TrEMBL
      A0A672UK95
      Conserved Domains (2) summary
      cd00032
      Location:158 → 413
      CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
      cd08332
      Location:1 → 87
      CARD_CASP2; Caspase activation and recruitment domain of Caspase-2

    RNA

    1. XR_003989410.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.