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    LOC107283618 protocadherin alpha-4-like [ Protobothrops mucrosquamatus ]

    Gene ID: 107283618, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC107283618
    Gene description
    protocadherin alpha-4-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Protobothrops mucrosquamatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
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    Genomic context

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    See LOC107283618 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386427.1 (6270137..6272620)

    NW_015386427.1Genomic Context describing neighboring genes Neighboring gene protocadherin-10-like Neighboring gene protocadherin alpha-6-like Neighboring gene protocadherin alpha-5-like Neighboring gene protocadherin alpha-5-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015386427 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin alpha-4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.Mucros_1.0 Primary Assembly

    Genomic

    1. NW_015386427.1 Reference P.Mucros_1.0 Primary Assembly

      Range
      6270137..6272620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029283269.1 → XP_029139102.1  protocadherin alpha-4-like

      Conserved Domains (4) summary
      cd11304
      Location:246 → 346
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:157 → 240
      CA; Cadherin repeats
      pfam08266
      Location:30 → 111
      Cadherin_2; Cadherin-like
      pfam16492
      Location:686 → 727
      Cadherin_C_2; Cadherin cytoplasmic C-terminal
    Nucleotide Protein
    Heading Accession and Version

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