3Q2W,3Q2W,3Q2W,3Q2W,2A4E,3LND


Conserved Protein Domain Family
CA

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smart00112: CA 
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Cadherin repeats.
Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.
Statistics
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PSSM-Id: 214520
Aligned: 273 rows
Threshold Bit Score: 43.1071
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3Q2W_A     131 TAIDADDp---NalNGM--LRYRILSQAPstpspNMFTINNETg-dIITVa-AgLDREKV-QQYTLIIQATDMEgnPtyg 202  house mouse
Q14517    2621 SDADEGSn---A--DIT--YAIEADSESVke--nLEINKLSGVi-tTKESliG-LENEF--FTFFVRAVDNGSPsk---e 2684 human
Q14517    1999 AVITAIGn------PINepLFYHILNPD------RRFKISRTSg-vLSTTgtP-FDREQQ-EAFDVVVEVTEEHkp---s 2060 human
O55134      54 RVEERRGk------AGD---AFQILQLPQa----LPVQMNSEDg--LLSTssR-LDREKLcrQEDPCLVSFDVLat---g 114  house mouse
NP_497641 2149 QIGNLSGe---E--SRE--FHYRIQDPEa----sKIFSIDKFGr--LFVAg-P-IDREQR-ATHEFQVEIDNEMmt---s 2209 nematode
NP_497917 1401 KASGESLg-------TKp-LVFNLFSVDDva-meDKIRVEPSSg--NVIVmeP-LDYEAA-RRIRAVVQVQQAN------ 1461 nematode
AAA28530    80 GTTVGFIp---T--KPK--FSYRFNEPP------REFTLDPVTg-eVKTNv-V-LDREGMrDHYDLVVLSSQ-------- 135  fruit fly
T15273      19 CASRLRLlssyT--LSLc-KILNVDISEEn----IFLKVDERSg--EISTiaH-LDYEKR-SKFDIVAVKVEES------ 81   nematode
AAB63283   173 HVRRFTH----M--SIC--PNYTISYGVVag-ssVPFAVDDSTselVVTA--Q-VDREEK-EVYHLDIVCMVRTerNl-e 238  zebrafish
P79726     171 PTARFTH----M--RIC--PNYTISYGVVag-ssVPFAVDDSTselVVTA--Q-VDREEK-EVYHLDIVCMVRTerNl-e 236  zebrafish
3Q2W_A     203 LSNTATAVITVTDVNDNPP 221  house mouse
Q14517    2685 SVVLVYVKILPPEMQLPKF 2703 human
Q14517    2061 AVAHVVVKVIVEDQNDNAP 2079 human
O55134     115 ASALIHVEIQVLDINDHQP 133  house mouse
NP_497641 2210 QKVQCKCHVIVLDENDNLP 2228 nematode
NP_497917 1462 MKSFATFSVNINDENDNSP 1480 nematode
AAA28530   136 PTYPIEVRIKVLDVNDNSP 154  fruit fly
T15273      82 -GETIDILVEVDDENDNAP 99   nematode
AAB63283   239 EV-FRSLHVNIYDEDDNSP 256  zebrafish
P79726     237 EVGFRSLHVNIYDEDDNSP 255  zebrafish
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