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    LOC103627723 uncharacterized LOC103627723 [ Zea mays ]

    Gene ID: 103627723, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC103627723
    Gene description
    uncharacterized LOC103627723
    Locus tag
    ZEAMMB73_Zm00001d018040
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G114371
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    Genomic context

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    See LOC103627723 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (215259798..215264810)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (212684877..212689770)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene NOD26-like membrane integral protein ZmNIP2-1 Neighboring gene uncharacterized LOC118472105 Neighboring gene uncharacterized LOC118472104 Neighboring gene protein SUR2 Neighboring gene uncharacterized LOC100191415

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC103627723
    Names
    DCD (Development and Cell Death) domain protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347116.1 → NP_001334045.1  uncharacterized protein LOC103627723

      Status: VALIDATED

      Source sequence(s)
      DN221186, DN227719, DV505324, EU964478
      UniProtKB/TrEMBL
      A0A096RUW1, A0A1D6HKB8, A0A3L6EK41, A0A8J8XHJ1
      Conserved Domains (1) summary
      pfam10539
      Location:172 → 292
      Dev_Cell_Death; Development and cell death domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      215259798..215264810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008648031.4 → XP_008646253.1  uncharacterized protein LOC103627723 isoform X1

      See identical proteins and their annotated locations for XP_008646253.1

      UniProtKB/TrEMBL
      A0A096RUW1, A0A1D6HKB8, A0A3L6EK41, A0A8J8XHJ1
      Conserved Domains (1) summary
      pfam10539
      Location:172 → 292
      Dev_Cell_Death; Development and cell death domain

    2. XM_020537556.3 → XP_020393145.1  uncharacterized protein LOC103627723 isoform X1

      UniProtKB/TrEMBL
      A0A096RUW1, A0A1D6HKB8, A0A3L6EK41, A0A8J8XHJ1
      Conserved Domains (1) summary
      pfam10539
      Location:172 → 292
      Dev_Cell_Death; Development and cell death domain

    RNA

    1. XR_553793.4 RNA Sequence

    2. XR_004849270.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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